1 | //======================================================================= |
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2 | // Copyright 1997, 1998, 1999, 2000 University of Notre Dame. |
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3 | // Copyright 2004, 2005 Trustees of Indiana University |
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4 | // Authors: Andrew Lumsdaine, Lie-Quan Lee, Jeremy G. Siek, |
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5 | // Doug Gregor, D. Kevin McGrath |
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6 | // |
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7 | // Distributed under the Boost Software License, Version 1.0. (See |
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8 | // accompanying file LICENSE_1_0.txt or copy at |
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9 | // http://www.boost.org/LICENSE_1_0.txt) |
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10 | //=======================================================================// |
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11 | #ifndef BOOST_GRAPH_KING_HPP |
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12 | #define BOOST_GRAPH_KING_HPP |
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13 | |
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14 | #include <boost/config.hpp> |
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15 | #include <boost/graph/detail/sparse_ordering.hpp> |
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16 | |
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17 | /* |
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18 | King Algorithm for matrix reordering |
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19 | */ |
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20 | |
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21 | namespace boost { |
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22 | namespace detail { |
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23 | template<typename OutputIterator, typename Buffer, typename Compare, |
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24 | typename PseudoDegreeMap, typename VecMap, typename VertexIndexMap> |
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25 | class bfs_king_visitor:public default_bfs_visitor |
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26 | { |
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27 | public: |
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28 | bfs_king_visitor(OutputIterator *iter, Buffer *b, Compare compare, |
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29 | PseudoDegreeMap deg, std::vector<int> loc, VecMap color, |
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30 | VertexIndexMap vertices): |
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31 | permutation(iter), Qptr(b), degree(deg), comp(compare), |
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32 | Qlocation(loc), colors(color), vertex_map(vertices) { } |
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33 | |
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34 | template <typename Vertex, typename Graph> |
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35 | void finish_vertex(Vertex, Graph& g) { |
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36 | typename graph_traits<Graph>::out_edge_iterator ei, ei_end; |
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37 | Vertex v, w; |
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38 | |
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39 | typedef typename std::deque<Vertex>::iterator iterator; |
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40 | typedef typename std::deque<Vertex>::reverse_iterator reverse_iterator; |
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41 | |
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42 | reverse_iterator rend = Qptr->rend()-index_begin; |
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43 | reverse_iterator rbegin = Qptr->rbegin(); |
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44 | |
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45 | |
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46 | //heap the vertices already there |
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47 | std::make_heap(rbegin, rend, boost::bind<bool>(comp, _2, _1)); |
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48 | |
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49 | unsigned i = 0; |
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50 | |
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51 | for(i = index_begin; i != Qptr->size(); ++i){ |
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52 | colors[get(vertex_map, (*Qptr)[i])] = 1; |
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53 | Qlocation[get(vertex_map, (*Qptr)[i])] = i; |
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54 | } |
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55 | |
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56 | i = 0; |
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57 | |
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58 | for( ; rbegin != rend; rend--){ |
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59 | percolate_down<Vertex>(i); |
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60 | w = (*Qptr)[index_begin+i]; |
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61 | for (tie(ei, ei_end) = out_edges(w, g); ei != ei_end; ++ei) { |
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62 | v = target(*ei, g); |
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63 | put(degree, v, get(degree, v) - 1); |
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64 | |
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65 | if (colors[get(vertex_map, v)] == 1) { |
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66 | percolate_up<Vertex>(get(vertex_map, v), i); |
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67 | } |
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68 | } |
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69 | |
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70 | colors[get(vertex_map, w)] = 0; |
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71 | i++; |
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72 | } |
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73 | } |
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74 | |
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75 | template <typename Vertex, typename Graph> |
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76 | void examine_vertex(Vertex u, const Graph&) { |
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77 | |
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78 | *(*permutation)++ = u; |
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79 | index_begin = Qptr->size(); |
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80 | |
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81 | } |
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82 | protected: |
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83 | |
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84 | |
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85 | //this function replaces pop_heap, and tracks state information |
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86 | template <typename Vertex> |
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87 | void percolate_down(int offset){ |
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88 | typedef typename std::deque<Vertex>::reverse_iterator reverse_iterator; |
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89 | |
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90 | int heap_last = index_begin + offset; |
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91 | int heap_first = Qptr->size() - 1; |
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92 | |
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93 | //pop_heap functionality: |
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94 | //swap first, last |
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95 | std::swap((*Qptr)[heap_last], (*Qptr)[heap_first]); |
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96 | |
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97 | //swap in the location queue |
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98 | std::swap(Qlocation[heap_first], Qlocation[heap_last]); |
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99 | |
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100 | //set drifter, children |
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101 | int drifter = heap_first; |
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102 | int drifter_heap = Qptr->size() - drifter; |
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103 | |
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104 | int right_child_heap = drifter_heap * 2 + 1; |
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105 | int right_child = Qptr->size() - right_child_heap; |
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106 | |
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107 | int left_child_heap = drifter_heap * 2; |
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108 | int left_child = Qptr->size() - left_child_heap; |
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109 | |
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110 | //check that we are staying in the heap |
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111 | bool valid = (right_child < heap_last) ? false : true; |
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112 | |
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113 | //pick smallest child of drifter, and keep in mind there might only be left child |
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114 | int smallest_child = (valid && get(degree, (*Qptr)[left_child]) > get(degree,(*Qptr)[right_child])) ? |
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115 | right_child : left_child; |
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116 | |
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117 | while(valid && smallest_child < heap_last && comp((*Qptr)[drifter], (*Qptr)[smallest_child])){ |
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118 | |
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119 | //if smallest child smaller than drifter, swap them |
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120 | std::swap((*Qptr)[smallest_child], (*Qptr)[drifter]); |
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121 | std::swap(Qlocation[drifter], Qlocation[smallest_child]); |
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122 | |
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123 | //update the values, run again, as necessary |
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124 | drifter = smallest_child; |
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125 | drifter_heap = Qptr->size() - drifter; |
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126 | |
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127 | right_child_heap = drifter_heap * 2 + 1; |
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128 | right_child = Qptr->size() - right_child_heap; |
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129 | |
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130 | left_child_heap = drifter_heap * 2; |
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131 | left_child = Qptr->size() - left_child_heap; |
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132 | |
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133 | valid = (right_child < heap_last) ? false : true; |
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134 | |
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135 | smallest_child = (valid && get(degree, (*Qptr)[left_child]) > get(degree,(*Qptr)[right_child])) ? |
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136 | right_child : left_child; |
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137 | } |
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138 | |
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139 | } |
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140 | |
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141 | |
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142 | |
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143 | // this is like percolate down, but we always compare against the |
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144 | // parent, as there is only a single choice |
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145 | template <typename Vertex> |
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146 | void percolate_up(int vertex, int offset){ |
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147 | |
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148 | int child_location = Qlocation[vertex]; |
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149 | int heap_child_location = Qptr->size() - child_location; |
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150 | int heap_parent_location = (int)(heap_child_location/2); |
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151 | unsigned parent_location = Qptr->size() - heap_parent_location; |
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152 | |
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153 | bool valid = (heap_parent_location != 0 && child_location > index_begin + offset && |
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154 | parent_location < Qptr->size()); |
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155 | |
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156 | while(valid && comp((*Qptr)[child_location], (*Qptr)[parent_location])){ |
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157 | |
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158 | //swap in the heap |
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159 | std::swap((*Qptr)[child_location], (*Qptr)[parent_location]); |
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160 | |
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161 | //swap in the location queue |
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162 | std::swap(Qlocation[child_location], Qlocation[parent_location]); |
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163 | |
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164 | child_location = parent_location; |
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165 | heap_child_location = heap_parent_location; |
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166 | heap_parent_location = (int)(heap_child_location/2); |
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167 | parent_location = Qptr->size() - heap_parent_location; |
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168 | valid = (heap_parent_location != 0 && child_location > index_begin + offset); |
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169 | } |
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170 | } |
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171 | |
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172 | OutputIterator *permutation; |
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173 | int index_begin; |
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174 | Buffer *Qptr; |
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175 | PseudoDegreeMap degree; |
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176 | Compare comp; |
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177 | std::vector<int> Qlocation; |
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178 | VecMap colors; |
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179 | VertexIndexMap vertex_map; |
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180 | }; |
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181 | |
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182 | |
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183 | } // namespace detail |
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184 | |
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185 | |
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186 | template<class Graph, class OutputIterator, class ColorMap, class DegreeMap, |
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187 | typename VertexIndexMap> |
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188 | OutputIterator |
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189 | king_ordering(const Graph& g, |
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190 | std::deque< typename graph_traits<Graph>::vertex_descriptor > |
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191 | vertex_queue, |
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192 | OutputIterator permutation, |
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193 | ColorMap color, DegreeMap degree, |
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194 | VertexIndexMap index_map) |
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195 | { |
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196 | typedef typename property_traits<DegreeMap>::value_type ds_type; |
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197 | typedef typename property_traits<ColorMap>::value_type ColorValue; |
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198 | typedef color_traits<ColorValue> Color; |
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199 | typedef typename graph_traits<Graph>::vertex_descriptor Vertex; |
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200 | typedef iterator_property_map<typename std::vector<ds_type>::iterator, VertexIndexMap, ds_type, ds_type&> PseudoDegreeMap; |
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201 | typedef indirect_cmp<PseudoDegreeMap, std::less<ds_type> > Compare; |
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202 | typedef typename boost::sparse::sparse_ordering_queue<Vertex> queue; |
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203 | typedef typename detail::bfs_king_visitor<OutputIterator, queue, Compare, |
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204 | PseudoDegreeMap, std::vector<int>, VertexIndexMap > Visitor; |
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205 | typedef typename graph_traits<Graph>::vertices_size_type |
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206 | vertices_size_type; |
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207 | std::vector<ds_type> pseudo_degree_vec(num_vertices(g)); |
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208 | PseudoDegreeMap pseudo_degree(pseudo_degree_vec.begin(), index_map); |
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209 | |
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210 | typename graph_traits<Graph>::vertex_iterator ui, ui_end; |
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211 | queue Q; |
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212 | // Copy degree to pseudo_degree |
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213 | // initialize the color map |
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214 | for (tie(ui, ui_end) = vertices(g); ui != ui_end; ++ui){ |
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215 | put(pseudo_degree, *ui, get(degree, *ui)); |
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216 | put(color, *ui, Color::white()); |
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217 | } |
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218 | |
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219 | Compare comp(pseudo_degree); |
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220 | std::vector<int> colors(num_vertices(g)); |
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221 | |
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222 | for(vertices_size_type i = 0; i < num_vertices(g); i++) |
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223 | colors[i] = 0; |
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224 | |
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225 | std::vector<int> loc(num_vertices(g)); |
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226 | |
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227 | //create the visitor |
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228 | Visitor vis(&permutation, &Q, comp, pseudo_degree, loc, colors, index_map); |
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229 | |
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230 | while( !vertex_queue.empty() ) { |
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231 | Vertex s = vertex_queue.front(); |
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232 | vertex_queue.pop_front(); |
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233 | |
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234 | //call BFS with visitor |
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235 | breadth_first_visit(g, s, Q, vis, color); |
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236 | } |
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237 | |
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238 | return permutation; |
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239 | } |
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240 | |
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241 | |
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242 | // This is the case where only a single starting vertex is supplied. |
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243 | template <class Graph, class OutputIterator, |
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244 | class ColorMap, class DegreeMap, typename VertexIndexMap> |
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245 | OutputIterator |
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246 | king_ordering(const Graph& g, |
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247 | typename graph_traits<Graph>::vertex_descriptor s, |
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248 | OutputIterator permutation, |
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249 | ColorMap color, DegreeMap degree, VertexIndexMap index_map) |
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250 | { |
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251 | |
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252 | std::deque< typename graph_traits<Graph>::vertex_descriptor > vertex_queue; |
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253 | vertex_queue.push_front( s ); |
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254 | return king_ordering(g, vertex_queue, permutation, color, degree, |
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255 | index_map); |
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256 | } |
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257 | |
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258 | |
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259 | template < class Graph, class OutputIterator, |
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260 | class ColorMap, class DegreeMap, class VertexIndexMap> |
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261 | OutputIterator |
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262 | king_ordering(const Graph& G, OutputIterator permutation, |
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263 | ColorMap color, DegreeMap degree, VertexIndexMap index_map) |
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264 | { |
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265 | if (vertices(G).first == vertices(G).second) |
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266 | return permutation; |
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267 | |
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268 | typedef typename boost::graph_traits<Graph>::vertex_descriptor Vertex; |
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269 | typedef typename boost::graph_traits<Graph>::vertex_iterator VerIter; |
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270 | typedef typename property_traits<ColorMap>::value_type ColorValue; |
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271 | typedef color_traits<ColorValue> Color; |
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272 | |
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273 | std::deque<Vertex> vertex_queue; |
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274 | |
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275 | // Mark everything white |
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276 | BGL_FORALL_VERTICES_T(v, G, Graph) put(color, v, Color::white()); |
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277 | |
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278 | // Find one vertex from each connected component |
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279 | BGL_FORALL_VERTICES_T(v, G, Graph) { |
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280 | if (get(color, v) == Color::white()) { |
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281 | depth_first_visit(G, v, dfs_visitor<>(), color); |
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282 | vertex_queue.push_back(v); |
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283 | } |
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284 | } |
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285 | |
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286 | // Find starting nodes for all vertices |
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287 | // TBD: How to do this with a directed graph? |
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288 | for (typename std::deque<Vertex>::iterator i = vertex_queue.begin(); |
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289 | i != vertex_queue.end(); ++i) |
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290 | *i = find_starting_node(G, *i, color, degree); |
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291 | |
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292 | return king_ordering(G, vertex_queue, permutation, color, degree, |
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293 | index_map); |
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294 | } |
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295 | |
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296 | template<typename Graph, typename OutputIterator, typename VertexIndexMap> |
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297 | OutputIterator |
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298 | king_ordering(const Graph& G, OutputIterator permutation, |
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299 | VertexIndexMap index_map) |
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300 | { |
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301 | if (vertices(G).first == vertices(G).second) |
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302 | return permutation; |
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303 | |
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304 | typedef out_degree_property_map<Graph> DegreeMap; |
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305 | std::vector<default_color_type> colors(num_vertices(G)); |
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306 | return king_ordering(G, permutation, |
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307 | make_iterator_property_map(&colors[0], index_map, |
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308 | colors[0]), |
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309 | make_out_degree_map(G), index_map); |
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310 | } |
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311 | |
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312 | template<typename Graph, typename OutputIterator> |
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313 | inline OutputIterator |
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314 | king_ordering(const Graph& G, OutputIterator permutation) |
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315 | { return king_ordering(G, permutation, get(vertex_index, G)); } |
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316 | |
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317 | } // namespace boost |
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318 | |
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319 | |
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320 | #endif // BOOST_GRAPH_KING_HPP |
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